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Aliases : Zm00001e023098
Description : transcription factor (LIM)
Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00259550 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.LIM... | 0.08 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00168710 | WLIM1,... | RNA biosynthesis.transcriptional activation.LIM... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G01780 | No alias | GATA type zinc finger transcription factor family protein | 0.11 | OrthoFinder output from all 47 species | |
| AT2G45800 | No alias | GATA type zinc finger transcription factor family protein | 0.09 | OrthoFinder output from all 47 species | |
| AT3G61230 | No alias | GATA type zinc finger transcription factor family protein | 0.11 | OrthoFinder output from all 47 species | |
| Adi_g004397 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g077331 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g106596 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g22808 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g02798 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g03396 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20871 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene16342.t1 | Aspi01Gene16342 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g04896 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06316 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20782 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g55644 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g65927 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G035600.1 | WLIM1, Ceric.14G035600 | LIM-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G067600.1 | WLIM1, Ceric.34G067600 | LIM-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.35G013400.1 | Ceric.35G013400 | LIM-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g37425 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g39322 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g14000 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03324 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05410 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05547 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g27988 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01019807001 | No alias | RNA biosynthesis.transcriptional activation.LIM... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01026849001 | No alias | RNA biosynthesis.transcriptional activation.LIM... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01037819001 | WLIM1 | RNA biosynthesis.transcriptional activation.LIM... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_09450 | No alias | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_11447 | WLIM1 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g42820.1 | LOC_Os02g42820 | transcription factor (LIM) | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os04g45010.1 | LOC_Os04g45010 | transcription factor (LIM) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os06g13030.1 | WLIM1, LOC_Os06g13030 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g35930.1 | LOC_Os10g35930 | transcription factor (LIM) | 0.18 | OrthoFinder output from all 47 species | |
| Len_g07886 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g14961 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g27678 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03797 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g21254 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03273 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g14059 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g00662 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16596 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001741 | WLIM1 | LIM-type transcription factor & original description: CDS=1-612 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14488 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo229974 | No alias | RNA biosynthesis.transcriptional activation.LIM... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g094320.3.1 | Solyc01g094320 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g114000.3.1 | WLIM1, Solyc03g114000 | transcription factor (LIM) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g049870.3.1 | Solyc05g049870 | transcription factor (LIM) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc08g007940.4.1 | Solyc08g007940 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g017520.3.1 | Solyc10g017520 | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g044740.2.1 | WLIM1, Solyc11g044740 | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g04562 | WLIM1 | LIM-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g41003 | No alias | LIM-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g12254 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029431_P002 | WLIM1, Zm00001e029431 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030885_P002 | WLIM1, Zm00001e030885 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003830 | beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | IEP | HCCA |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0005096 | GTPase activator activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| No external refs found! |