1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e023022_P001

Zm00001e023022_P001 (LSH4, Zm00001e023022)


Aliases : LSH4, Zm00001e023022

Description : Protein G1-like3 OS=Oryza sativa subsp. indica (sp|b8ah02|g1l3_orysi : 213.0)


Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023022_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G23290 LSH4 No description available 0.03 OrthoFinder output from all 47 species
AT5G28490 LSH1 Protein of unknown function (DUF640) 0.02 OrthoFinder output from all 47 species
Azfi_s3307.g115288 LSH6 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g24783 LSH4 plant-specific ALOG-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dac_g18837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44523 LSH4 plant-specific ALOG-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.02 OrthoFinder output from all 47 species
GSVIVT01027827001 LSH10 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028348001 LSH3 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.06 OrthoFinder output from all 47 species
LOC_Os01g61310.1 LSH6, LOC_Os01g61310 Protein G1-like7 OS=Oryza sativa subsp. indica... 0.08 OrthoFinder output from all 47 species
LOC_Os02g07030.1 LSH4, LOC_Os02g07030 Protein G1-like1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os02g41460.1 LSH4, LOC_Os02g41460 Protein G1-like3 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43580.2 LSH4, LOC_Os04g43580 Protein G1-like3 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g46030.1 LSH4, LOC_Os06g46030 Protein G1-like2 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
LOC_Os07g04670.1 LSH6, LOC_Os07g04670 Protein G1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0149.g023275 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc06g083860.2.1 LSH3, Solyc06g083860 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.04 OrthoFinder output from all 47 species
Solyc07g150147.1.1 LSH10, Solyc07g150147 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.04 OrthoFinder output from all 47 species
Solyc09g025280.1.1 LSH4, Solyc09g025280 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 OrthoFinder output from all 47 species
Spa_g07735 LSH4 plant-specific ALOG-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Spa_g22798 LSH4 plant-specific ALOG-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Zm00001e013711_P001 LSH4, Zm00001e013711 Protein G1-like2 OS=Oryza sativa subsp. indica... 0.05 OrthoFinder output from all 47 species
Zm00001e027283_P001 LSH6, Zm00001e027283 Protein G1-like8 OS=Oryza sativa subsp. japonica... 0.09 OrthoFinder output from all 47 species
Zm00001e032784_P001 LSH6, Zm00001e032784 Protein G1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006694 steroid biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006936 ALOG_dom 39 158
No external refs found!