Aliases : Zm00001e022965
Description : Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana (sp|q84wu2|ubp13_arath : 87.4)
Gene families : OG0002960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002960_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00065p00122030 | evm_27.TU.AmTr_v1... | Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AT2G25320 | No alias | TRAF-like family protein | 0.11 | OrthoFinder output from all 47 species | |
Adi_g098468 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g01607 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g05545 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g35642 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Aob_g16408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g36780 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0042.g026935 | No alias | not classified & original description: CDS=339-5477 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G028800.1 | Ceric.02G028800 | not classified & original description: pacid=50585664... | 0.08 | OrthoFinder output from all 47 species | |
Ceric.07G070900.1 | Ceric.07G070900 | not classified & original description: pacid=50626059... | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g12067 | No alias | not classified & original description: none | 0.12 | OrthoFinder output from all 47 species | |
GSVIVT01035878001 | No alias | Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana | 0.12 | OrthoFinder output from all 47 species | |
LOC_Os02g39990.1 | LOC_Os02g39990 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_10430470g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
MA_10432878g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_24634g0010 | No alias | Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
MA_9624g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
Mp8g09710.1 | No alias | MATH domain and coiled-coil domain-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g29897 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Smo173767 | No alias | Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
Solyc06g017970.4.1 | Solyc06g017970 | Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006479 | protein methylation | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
BP | GO:0008213 | protein alkylation | IEP | HCCA |
MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016571 | histone methylation | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |