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  5. Zm00001e022915_P001

Zm00001e022915_P001 (STO, Zm00001e022915)


Aliases : STO, Zm00001e022915

Description : transcription factor (BBX-DBB)


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e022915_P001
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00250410 LZF1, STH3,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G06040 STO B-box zinc finger family protein 0.05 OrthoFinder output from all 47 species
AT1G75540 STH2 salt tolerance homolog2 0.05 OrthoFinder output from all 47 species
AT1G78600 LZF1, STH3, DBB3 light-regulated zinc finger protein 1 0.04 OrthoFinder output from all 47 species
AT2G31380 STH salt tolerance homologue 0.06 OrthoFinder output from all 47 species
AT2G47890 No alias B-box type zinc finger protein with CCT domain 0.04 OrthoFinder output from all 47 species
AT4G10240 No alias B-box zinc finger family protein 0.05 OrthoFinder output from all 47 species
AT4G38960 No alias B-box type zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g057496 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057497 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14676 STO BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g28425 No alias BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06573 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08244 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11974 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g01696 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06936 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19117 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08384.t1 LZF1, STH3,... BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09321.t1 Aspi01Gene09321 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45209.t1 LZF1, STH3,... BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59299.t1 STO, Aspi01Gene59299 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62651.t1 Aspi01Gene62651 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62651.t2 Aspi01Gene62651 BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009705 No alias BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056620 STO BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G021600.1 Ceric.11G021600 BBX class-IV transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.17G005800.1 STO, Ceric.17G005800 BBX class-IV transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dac_g08426 STH BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37029 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01138 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02213 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024173001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Gb_35653 No alias B-box zinc finger protein 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_39727 STH transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g39360.1 STH, LOC_Os02g39360 transcription factor (BBX-DBB) 0.06 OrthoFinder output from all 47 species
LOC_Os04g41560.2 STO, LOC_Os04g41560 transcription factor (BBX-DBB) 0.05 OrthoFinder output from all 47 species
LOC_Os05g11510.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g49880.1 STH2, LOC_Os06g49880 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
LOC_Os09g35880.1 LOC_Os09g35880 transcription factor (BBX-DBB) 0.11 OrthoFinder output from all 47 species
Len_g30217 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21663 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07843 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28592 STO BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65956 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06206 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20549 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16992 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31497 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32457 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018285 STO BBX class-IV transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sam_g03827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g41002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Smo271535 STO RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Solyc01g110370.4.1 Solyc01g110370 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Solyc12g089240.2.1 STH2, Solyc12g089240 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Spa_g30262 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56814 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 55 95
IPR000315 Znf_B-box 4 47
No external refs found!