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  5. Zm00001e022679_P001

Zm00001e022679_P001 (CMPG2, ATCMPG2, Zm00001e022679)


Aliases : CMPG2, ATCMPG2, Zm00001e022679

Description : U-box domain-containing protein 29 OS=Arabidopsis thaliana (sp|q9lsa6|pub29_arath : 116.0)


Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e022679_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00053700 evm_27.TU.AmTr_v1... U-box domain-containing protein 21 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G02840 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G19380 PUB25 plant U-box 25 0.03 OrthoFinder output from all 47 species
AT3G52450 PUB22 plant U-box 22 0.02 OrthoFinder output from all 47 species
AT5G37490 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.03 OrthoFinder output from all 47 species
Adi_g003285 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054744 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077174 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16119 PUB25 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38062 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02187 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10929 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12715 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23643 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30969 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33086 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40105 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12417 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16033 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04412 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18467.t1 PUB23, Aspi01Gene18467 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19337.t1 PUB26, Aspi01Gene19337 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19337.t2 PUB26, Aspi01Gene19337 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene19350.t1 PUB26, Aspi01Gene19350 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19351.t1 Aspi01Gene19351 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43215.t1 PUB24, Aspi01Gene43215 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56365.t1 PUB25, Aspi01Gene56365 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G007700.1 PUB23, Ceric.10G007700 not classified & original description: pacid=50612519... 0.02 OrthoFinder output from all 47 species
Ceric.19G059800.1 PUB26, Ceric.19G059800 not classified & original description: pacid=50575490... 0.03 OrthoFinder output from all 47 species
Ceric.21G081600.1 PUB26, Ceric.21G081600 U-Box-group-III E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
Dac_g10662 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01209 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01521 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04484 PUB25 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04516 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07421 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g31575 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46168 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39747 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03660 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14998 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011139001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011140001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011616001 CMPG1, ATCMPG1 U-box domain-containing protein 20 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_02490 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_02628 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_02629 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_02633 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_02635 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_17119 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_27794 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_29851 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g64570.1 PUB23, LOC_Os01g64570 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g33680.1 CMPG2, ATCMPG2,... U-box domain-containing protein 29 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g50460.1 LOC_Os02g50460 U-box domain-containing protein 20 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g13740.1 LOC_Os03g13740 U-box domain-containing protein 20 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g34030.1 PUB23, LOC_Os04g34030 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g13870.1 LOC_Os06g13870 U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os10g03440.1 LOC_Os10g03440 U-box domain-containing protein 20 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os12g06410.1 PUB24, LOC_Os12g06410 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g01810 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31416 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432813g0010 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10433846g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_48004g0010 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_52661g0010 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_5536318g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8837995g0010 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp2g06090.1 PUB25 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Mp3g01700.1 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g11730.1 PUB25 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Mp3g22750.1 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp7g11000.1 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g38744 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09373 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09512 PUB29, ATPUB29 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08919 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10378 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21647 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29206 PUB25 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29544 PUB23 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33878 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35004 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36530 PUB23 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42463 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12470 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19356 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_4891V3.1 PUB29, ATPUB29,... plant U-box 26 0.01 OrthoFinder output from all 47 species
Ppi_g18199 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015794 PUB26 U-Box-group-III E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020660 No alias not classified & original description: CDS=1-1503 0.03 OrthoFinder output from all 47 species
Smo104879 PUB25 U-box domain-containing protein 25 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo416356 PUB26 U-box domain-containing protein 30 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo426053 PUB26 U-box domain-containing protein 26 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g007010.2.1 PUB22, Solyc01g007010 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g007040.4.1 PUB22, Solyc01g007040 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g107980.3.1 PUB26, Solyc01g107980 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g008100.3.1 Solyc04g008100 U-box domain-containing protein 21 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc04g071030.1.1 Solyc04g071030 E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
Zm00001e006484_P001 PUB23, Zm00001e006484 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014752_P001 PUB23, Zm00001e014752 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e022698_P001 PUB26, Zm00001e022698 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e036030_P001 Zm00001e036030 U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 16 84
No external refs found!