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  5. Zm00001e022385_P001

Zm00001e022385_P001 (CDF1, Zm00001e022385)


Aliases : CDF1, Zm00001e022385

Description : light-dependent protochlorophyllide oxidoreductase chaperone (CPP1)


Gene families : OG0002327 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002327_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e022385_P001

Target Alias Description ECC score Gene Family Method Actions
Aev_g11974 CDF1 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.02 OrthoFinder output from all 47 species
Ala_g01273 CDF1 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.05 OrthoFinder output from all 47 species
Cba_g09791 CDF1 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.03 OrthoFinder output from all 47 species
Ceric.18G061300.1 CDF1, Ceric.18G061300 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.33 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g13390 CDF1 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.03 OrthoFinder output from all 47 species
Dde_g01311 CDF1 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.02 OrthoFinder output from all 47 species
Len_g10603 CDF1 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.03 OrthoFinder output from all 47 species
Lfl_g19687 CDF1 chaperone of protochlorophyllide oxidoreductase *(CPP1)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR021788 CPP1-like 81 261
No external refs found!