Zm00001e022322_P001 (Zm00001e022322)

Aliases : Zm00001e022322

Description : transcription factor (mTERF)

Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e022322_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00117910	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00010p00225250	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00225430	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00230750	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00236050	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00236280	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00236880	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00038p00175390	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00060p00059830	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00066p00157220	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s02857p00005060	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AT1G62110	No alias	Mitochondrial transcription termination factor family protein	0.05	OrthoFinder output from all 47 species
AT3G46950	No alias	Mitochondrial transcription termination factor family protein	0.05	OrthoFinder output from all 47 species
AT5G07900	No alias	Mitochondrial transcription termination factor family protein	0.02	OrthoFinder output from all 47 species
AT5G23930	No alias	Mitochondrial transcription termination factor family protein	0.04	OrthoFinder output from all 47 species
Aev_g02436	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g21021	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g49279	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g05815	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g08791	EMB2219	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g28440	EMB2219	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Als_g60921	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g05752	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g26943	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g28360	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene13036.t1	EMB2219, Aspi01Gene13036	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g01911	EMB93, SOLDAT10	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g12846	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14738	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.05G060600.1	Ceric.05G060600	mTERF-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.20G017100.1	Ceric.20G017100	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.30G015700.1	Ceric.30G015700	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.31G027900.1	Ceric.31G027900	mTERF-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Dac_g31748	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g05343	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g09151	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g13929	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g22736	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g10365	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13193	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01022213001	No alias	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
GSVIVT01036787001	No alias	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
Gb_07257	PTAC15	TAC15 cofactor of plastid-encoded RNA polymerase....	0.03	OrthoFinder output from all 47 species
Gb_15878	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Gb_26175	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Gb_26213	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os04g54510.1	LOC_Os04g54510	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
LOC_Os05g33440.1	LOC_Os05g33440	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
LOC_Os05g33460.2	LOC_Os05g33460	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
LOC_Os05g34160.1	LOC_Os05g34160	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
LOC_Os06g12110.1	LOC_Os06g12110	transcription factor (mTERF)	0.1	OrthoFinder output from all 47 species
LOC_Os07g24090.1	LOC_Os07g24090	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os11g10000.1	LOC_Os11g10000	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
LOC_Os11g10040.1	LOC_Os11g10040	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os12g30610.1	LOC_Os12g30610	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Len_g13324	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g35819	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05600	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g09963	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g10120	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10083329g0010	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
MA_10436066g0010	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
MA_192398g0010	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
MA_3151g0010	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
MA_493420g0010	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
MA_804585g0010	PTAC15	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Pir_g33567	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022388	PTAC15	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g00521	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g24410	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g24968	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g011700.2.1	Solyc04g011700	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Solyc04g051880.3.1	Solyc04g051880	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Solyc04g072500.1.1	Solyc04g072500	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Solyc04g072520.3.1	Solyc04g072520	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
Solyc04g072530.2.1	Solyc04g072530	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Spa_g56015	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g07429	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g12946	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g21097	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g31139	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008097	5S rRNA binding	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	99	381

External Links

No external refs found!

Zm00001e022322_P001 (Zm00001e022322)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation