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  5. Zm00001e022279_P005

Zm00001e022279_P005 (XBAT32, Zm00001e022279)


Aliases : XBAT32, Zm00001e022279

Description : RING-HC-class E3 ligase


Gene families : OG0001806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e022279_P005

Target Alias Description ECC score Gene Family Method Actions
Adi_g060613 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g126905 XBAT33 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015919 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: CDS=333-1826 0.03 OrthoFinder output from all 47 species
LOC_Os08g15840.5 XBAT32, LOC_Os08g15840 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Len_g16727 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32042 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01650 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12405 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12015 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 64 94
IPR002110 Ankyrin_rpt 236 266
IPR020683 DUF3447 100 220
No external refs found!