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  5. Zm00001e022043_P001

Zm00001e022043_P001 (Zm00001e022043)


Aliases : Zm00001e022043

Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana (sp|q9lx14|ufc_arath : 113.0)


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e022043_P001
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00083270 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT5G59790 No alias Domain of unknown function (DUF966) 0.02 OrthoFinder output from all 47 species
Aev_g07884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08984.t1 Aspi01Gene08984 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25837.t1 Aspi01Gene25837 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53794.t1 Aspi01Gene53794 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53794.t2 Aspi01Gene53794 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58852.t1 Aspi01Gene58852 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G080300.1 Ceric.23G080300 not classified & original description: pacid=50610288... 0.02 OrthoFinder output from all 47 species
Dac_g16699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031468001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01031469001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g48600.1 LOC_Os03g48600 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os08g44760.1 LOC_Os08g44760 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Lfl_g18739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_3651g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g39402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50494 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g054800.3.1 Solyc04g054800 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g030470.4.1 Solyc06g030470 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g066380.3.1 Solyc11g066380 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g49772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033556_P002 Zm00001e033556 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 64 482
No external refs found!