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  5. Zm00001e021940_P001

Zm00001e021940_P001 (Zm00001e021940)


Aliases : Zm00001e021940

Description : Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana (sp|q94jx6|pp391_arath : 434.0)


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021940_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G77360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G49730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G43820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g18089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31661.t1 Aspi01Gene31661 group-II intron mitochondrial splicing factor *(MISF68)... 0.03 OrthoFinder output from all 47 species
Dcu_g04707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013390001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01014289001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_22860 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.04 OrthoFinder output from all 47 species
Gb_31784 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.03 OrthoFinder output from all 47 species
Gb_41835 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g51840.1 LOC_Os03g51840 Pentatricopeptide repeat-containing protein At3g49730... 0.02 OrthoFinder output from all 47 species
LOC_Os08g41380.1 LOC_Os08g41380 Pentatricopeptide repeat-containing protein At5g18390,... 0.02 OrthoFinder output from all 47 species
MA_355286g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.03 OrthoFinder output from all 47 species
Solyc03g112560.4.1 Solyc03g112560 Pentatricopeptide repeat-containing protein At1g80550,... 0.02 OrthoFinder output from all 47 species
Solyc04g081950.4.1 Solyc04g081950 Pentatricopeptide repeat-containing protein At1g20300,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 282 331
IPR002885 Pentatricopeptide_repeat 357 400
IPR002885 Pentatricopeptide_repeat 180 225
IPR002885 Pentatricopeptide_repeat 146 175
No external refs found!