1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e021852_P001

Zm00001e021852_P001 (Zm00001e021852)


Aliases : Zm00001e021852

Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana (sp|q9asp6|hnrpq_arath : 386.0)


Gene families : OG0002016 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002016_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021852_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00254940 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00031p00165100 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g109709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0050.g031136 No alias not classified & original description: CDS=145-1557 0.03 OrthoFinder output from all 47 species
Ceric.38G037000.1 Ceric.38G037000 not classified & original description: pacid=50579751... 0.03 OrthoFinder output from all 47 species
Dac_g16114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_14828 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os10g06130.1 LOC_Os10g06130 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os11g14430.2 LOC_Os11g14430 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_10435174g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ore_g08658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo169951 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc10g009220.3.1 Solyc10g009220 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 283 351
IPR000504 RRM_dom 187 250
IPR000504 RRM_dom 107 177
No external refs found!