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  5. Zm00001e021803_P001

Zm00001e021803_P001 (SMP1, Zm00001e021803)


Aliases : SMP1, Zm00001e021803

Description : Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. japonica (sp|q6zk48|slu7_orysj : 806.0)


Gene families : OG0003342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021803_P001
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00141610 SMP1,... Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. indica 0.02 OrthoFinder output from all 47 species
Mp1g12350.1 SMP1 Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Msp_g12686 SMP1 splicing factor *(SMP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47310 No alias splicing factor *(SMP) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g10776 SMP1 splicing factor *(SMP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR021715 Slu7_dom 136 403
No external refs found!