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  5. Zm00001e021618_P001

Zm00001e021618_P001 (ATG8C, Zm00001e021618)


Aliases : ATG8C, Zm00001e021618

Description : ATG8 autophagosome ubiquitin-fold protein


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021618_P001
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00146990 ATG8C,... Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.01 OrthoFinder output from all 47 species
AMTR_s00044p00225880 ATG8F,... Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.01 OrthoFinder output from all 47 species
Adi_g014045 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Adi_g014046 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.01 OrthoFinder output from all 47 species
Adi_g016835 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Adi_g081136 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Aev_g06303 ATG8A, APG8A autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Ala_g00497 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Als_g31042 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.01 OrthoFinder output from all 47 species
Als_g37361 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Ceric.27G065300.1 ATG8F, Ceric.27G065300 autophagosome ubiquitin-fold protein *(ATG8) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g47748 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.05 OrthoFinder output from all 47 species
Dde_g01928 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08113 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g26811 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01027638001 ATG8F Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.07 OrthoFinder output from all 47 species
Gb_21524 ATG8F ATG8 autophagosome ubiquitin-fold protein 0.03 OrthoFinder output from all 47 species
LOC_Os04g53240.4 ATG8C, LOC_Os04g53240 ATG8 autophagosome ubiquitin-fold protein 0.05 OrthoFinder output from all 47 species
Mp1g21590.1 ATG8C ATG8 autophagosome ubiquitin-fold protein 0.01 OrthoFinder output from all 47 species
Mp5g05930.1 ATG8D ATG8 autophagosome ubiquitin-fold protein 0.01 OrthoFinder output from all 47 species
Msp_g03687 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.01 OrthoFinder output from all 47 species
Msp_g17208 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Msp_g25613 ATG8E, ATATG8E autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g05523 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.01 OrthoFinder output from all 47 species
Ppi_g53060 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Sam_g06209 No alias autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 45 148
No external refs found!