AMTR_s00057p00154460 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.142

Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase

Gene families : OG_01_0000278 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000278_tree ,
OG_02_0007349 (LandPlants) Phylogenetic Tree(s): OG_02_0007349_tree ,
OG_03_0003218 (SeedPlants) Phylogenetic Tree(s): OG_03_0003218_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00057p00154460
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00098p00153370	evm_27.TU.AmTr_v1...	Carbohydrate metabolism.starch...	0.05	Archaeplastida
AT4G15210	RAM1, BMY1,...	beta-amylase 5	0.03	Archaeplastida
Cre06.g270350	No alias	Carbohydrate metabolism.starch...	0.02	Archaeplastida
Cre06.g307150	No alias	Carbohydrate metabolism.starch...	0.02	Archaeplastida
Gb_14166	No alias	beta amylase	0.03	Archaeplastida
LOC_Os07g35880.1	No alias	beta amylase	0.03	Archaeplastida
Solyc01g067660.3.1	No alias	beta amylase	0.03	Archaeplastida
Gb_27777	No alias	beta amylase	0.01	LandPlants
Solyc01g067660.3.1	No alias	beta amylase	0.03	LandPlants
Gb_27777	No alias	beta amylase	0.01	SeedPlants
Solyc01g067660.3.1	No alias	beta amylase	0.02	SeedPlants
Zm00001e001671_P001	No alias	beta amylase	0.01	SeedPlants
Zm00001e038205_P001	No alias	beta amylase	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	83	476

External Links

No external refs found!