AMTR_s00057p00154460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.142

Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase


Gene families : OG_01_0000278 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000278_tree ,
OG_02_0007349 (LandPlants) Phylogenetic Tree(s): OG_02_0007349_tree ,
OG_03_0003218 (SeedPlants) Phylogenetic Tree(s): OG_03_0003218_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00154460
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00098p00153370 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.05 Archaeplastida
AT4G15210 RAM1, BMY1,... beta-amylase 5 0.03 Archaeplastida
Cre06.g270350 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Cre06.g307150 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Gb_14166 No alias beta amylase 0.03 Archaeplastida
LOC_Os07g35880.1 No alias beta amylase 0.03 Archaeplastida
Solyc01g067660.3.1 No alias beta amylase 0.03 Archaeplastida
Gb_27777 No alias beta amylase 0.01 LandPlants
Solyc01g067660.3.1 No alias beta amylase 0.03 LandPlants
Gb_27777 No alias beta amylase 0.01 SeedPlants
Solyc01g067660.3.1 No alias beta amylase 0.02 SeedPlants
Zm00001e001671_P001 No alias beta amylase 0.01 SeedPlants
Zm00001e038205_P001 No alias beta amylase 0.01 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 83 476
No external refs found!