Zm00001e021584_P008 (SK21, ASK21, Zm00001e021584)

Aliases : SK21, ASK21, Zm00001e021584

Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes

Gene families : OG0005505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005505_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e021584_P008

Target	Alias	Description	ECC score	Gene Family Method
Ceric.06G090100.1	SK21, ASK21,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000197.16	SK20, ASK20	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
Dcu_g04680	SK21, ASK21	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Sam_g28631	No alias	ASK-type linker component of SCF E3 ubiquitin ligase...	0.04	OrthoFinder output from all 47 species
Smo115864	SK21, ASK21	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000149	SNARE binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003909	DNA ligase activity	IEP	HCCA
MF	GO:0003910	DNA ligase (ATP) activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	HCCA
MF	GO:0019905	syntaxin binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016072	Skp1_comp_dimer	118	154

External Links

No external refs found!