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  5. Zm00001e021401_P001

Zm00001e021401_P001 (UBQ11, Zm00001e021401)


Aliases : UBQ11, Zm00001e021401

Description : Polyubiquitin 3 OS=Oryza sativa subsp. japonica (sp|q58g87|ubq3_orysj : 181.0)


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021401_P001
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G53930 No alias Ubiquitin-like superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g58040 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14593 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58963 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13975 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G032100.1 RUB1, ATRUB1,... RUB ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
LOC_Os08g08760.1 LOC_Os08g08760 Polyubiquitin 3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os09g25320.1 RUB1, ATRUB1,... ubiquitin-fold protein (RUB) 0.02 OrthoFinder output from all 47 species
Pir_g04702 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66317 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_11430V3.1 UBQ14, Pp3c4_11430 polyubiquitin 10 0.01 OrthoFinder output from all 47 species
Tin_g24678 UBQ14 UBQ ubiquiTin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 71 138
IPR000626 Ubiquitin-like_dom 149 215
IPR000626 Ubiquitin-like_dom 3 62
No external refs found!