Zm00001e021243_P003 (Zm00001e021243)

Aliases : Zm00001e021243

Description : GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana (sp|q0wtb4|y3725_arath : 148.0)

Gene families : OG0006792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006792_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e021243_P003

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00233660	evm_27.TU.AmTr_v1...	GTP-binding protein At3g49725, chloroplastic...	0.05	OrthoFinder output from all 47 species
AT5G57960	No alias	GTP-binding protein, HflX	0.06	OrthoFinder output from all 47 species
Adi_g059600	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g02139	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g03113	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g16169	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g10418	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.34G037600.1	Ceric.34G037600	not classified & original description: pacid=50623913...	0.08	OrthoFinder output from all 47 species
Cre16.g665650	No alias	GTP-binding protein At3g49725, chloroplastic...	0.01	OrthoFinder output from all 47 species
GSVIVT01009778001	No alias	GTP-binding protein At3g49725, chloroplastic...	0.04	OrthoFinder output from all 47 species
Gb_27515	No alias	component MED19 of head module of MEDIATOR transcription...	0.06	OrthoFinder output from all 47 species
LOC_Os11g38020.1	LOC_Os11g38020	GTP-binding protein At3g49725, chloroplastic...	0.13	OrthoFinder output from all 47 species
MA_10437248g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp8g01100.1	No alias	GTP-binding protein At3g49725, chloroplastic...	0.04	OrthoFinder output from all 47 species
Nbi_g31437	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19828	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g48993	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g13180	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g64021	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Smo77541	No alias	GTP-binding protein At3g49725, chloroplastic...	0.03	OrthoFinder output from all 47 species
Solyc04g080770.3.1	Solyc04g080770	GTP-binding protein At3g49725, chloroplastic...	0.06	OrthoFinder output from all 47 species
Spa_g07834	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g29956	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032305	GTP-bd_M	245	322
IPR006073	GTP-bd	330	448
IPR025121	GTPase_HflX_N	153	242

External Links

No external refs found!

Zm00001e021243_P003 (Zm00001e021243)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation