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  5. Zm00001e020954_P001

Zm00001e020954_P001 (Zm00001e020954)


Aliases : Zm00001e020954

Description : Putative disease resistance protein RGA4 OS=Solanum bulbocastanum (sp|q7xa39|rga4_solbu : 259.0)


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020954_P001
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000642001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01000656001 HRT, RCY1, RPP8 Putative disease resistance protein At3g14460... 0.07 OrthoFinder output from all 47 species
GSVIVT01004021001 No alias Putative disease resistance RPP13-like protein 1... 0.06 OrthoFinder output from all 47 species
GSVIVT01006243001 No alias Putative disease resistance protein At3g14460... 0.05 OrthoFinder output from all 47 species
GSVIVT01022851001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01022856001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01022859001 No alias Putative disease resistance protein At3g14460... 0.06 OrthoFinder output from all 47 species
GSVIVT01022931001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01022937001 No alias Putative disease resistance RPP13-like protein 1... 0.5 OrthoFinder output from all 47 species
GSVIVT01022947001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01023324001 No alias Putative disease resistance RPP13-like protein 1... 0.14 OrthoFinder output from all 47 species
GSVIVT01027229001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01036628001 RPM1, RPS3 Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os04g02110.1 LOC_Os04g02110 Putative disease resistance protein At3g14460... 0.04 OrthoFinder output from all 47 species
LOC_Os04g43340.1 LOC_Os04g43340 Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os07g17220.1 LOC_Os07g17220 Putative disease resistance protein At3g14460... 0.02 OrthoFinder output from all 47 species
LOC_Os07g17250.1 LOC_Os07g17250 Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
LOC_Os08g43000.1 LOC_Os08g43000 Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
LOC_Os08g43050.1 LOC_Os08g43050 Putative disease resistance protein RGA1 OS=Solanum... 0.02 OrthoFinder output from all 47 species
LOC_Os09g14490.1 LOC_Os09g14490 Putative disease resistance RPP13-like protein 1... 0.01 OrthoFinder output from all 47 species
LOC_Os11g29110.1 LOC_Os11g29110 Putative disease resistance protein RGA4 OS=Solanum... 0.03 OrthoFinder output from all 47 species
LOC_Os12g03750.1 LOC_Os12g03750 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.07 OrthoFinder output from all 47 species
LOC_Os12g32680.1 LOC_Os12g32680 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.25 OrthoFinder output from all 47 species
Solyc11g071430.1.1 Solyc11g071430 Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 5 102
No external refs found!