1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e020787_P001

Zm00001e020787_P001 (Zm00001e020787)


Aliases : Zm00001e020787

Description : component CAP-H of condensin I complex


Gene families : OG0005098 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005098_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020787_P001
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00055930 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromatin... 0.11 OrthoFinder output from all 47 species
AT2G32590 No alias LOCATED IN: chloroplast; EXPRESSED IN: 17 plant... 0.2 OrthoFinder output from all 47 species
Ala_g22424 No alias component *(CAP-H) of condensin I complex & original... 0.08 OrthoFinder output from all 47 species
Als_g40608 No alias component *(CAP-H) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Als_g48614 No alias component *(CAP-H) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g08545 No alias component *(CAP-H) of condensin I complex & original... 0.14 OrthoFinder output from all 47 species
Aspi01Gene20029.t1 Aspi01Gene20029 component *(CAP-H) of condensin I complex & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene24141.t1 Aspi01Gene24141 component *(CAP-H) of condensin I complex & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0509.g074694 No alias component *(CAP-H) of condensin I complex & original... 0.12 OrthoFinder output from all 47 species
Ceric.07G099800.1 Ceric.07G099800 component *(CAP-H) of condensin I complex & original... 0.23 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021462.43 No alias Cell cycle.mitosis and meiosis.chromatin... 0.06 OrthoFinder output from all 47 species
Cre13.g589300 No alias Cell cycle.mitosis and meiosis.chromatin... 0.06 OrthoFinder output from all 47 species
Dac_g15657 No alias component *(CAP-H) of condensin I complex & original... 0.08 OrthoFinder output from all 47 species
Dcu_g36452 No alias component *(CAP-H) of condensin I complex & original... 0.14 OrthoFinder output from all 47 species
GSVIVT01030475001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.2 OrthoFinder output from all 47 species
Gb_02904 No alias component CAP-H of condensin I complex 0.14 OrthoFinder output from all 47 species
Gb_19968 No alias component CAP-H of condensin I complex 0.02 OrthoFinder output from all 47 species
LOC_Os01g34870.1 LOC_Os01g34870 component CAP-H of condensin I complex 0.17 OrthoFinder output from all 47 species
Len_g11591 No alias component *(CAP-H) of condensin I complex & original... 0.09 OrthoFinder output from all 47 species
Lfl_g18514 No alias component *(CAP-H) of condensin I complex & original... 0.02 OrthoFinder output from all 47 species
MA_10431431g0010 No alias component CAP-H of condensin I complex 0.11 OrthoFinder output from all 47 species
MA_98643g0010 No alias component CAP-H of condensin I complex 0.06 OrthoFinder output from all 47 species
Mp1g27450.1 No alias component CAP-H of condensin I complex 0.15 OrthoFinder output from all 47 species
Msp_g14467 No alias component *(CAP-H) of condensin I complex & original... 0.13 OrthoFinder output from all 47 species
Nbi_g03738 No alias component *(CAP-H) of condensin I complex & original... 0.18 OrthoFinder output from all 47 species
Ore_g28177 No alias component *(CAP-H) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03206 No alias component *(CAP-H) of condensin I complex & original... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000557 No alias component *(CAP-H) of condensin I complex & original... 0.05 OrthoFinder output from all 47 species
Solyc07g049680.4.1 Solyc07g049680 component CAP-H of condensin I complex 0.12 OrthoFinder output from all 47 species
Spa_g12373 No alias component *(CAP-H) of condensin I complex & original... 0.12 OrthoFinder output from all 47 species
Spa_g51155 No alias component *(CAP-H) of condensin I complex & original... 0.11 OrthoFinder output from all 47 species
Tin_g04131 No alias component *(CAP-H) of condensin I complex & original... 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEA Interproscan
BP GO:0007076 mitotic chromosome condensation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022816 Condensin_barren_su2 35 526
IPR022816 Condensin_barren_su2 557 664
No external refs found!