Aliases : emb1796, Zm00001e020614
Description : Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana (sp|q9m3a8|pp273_arath : 501.0)
Gene families : OG0010708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010708_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e020614_P001 | |
Cluster | HCCA: Cluster_154 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G49240 | emb1796 | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Gb_33747 | emb1796 | Pentatricopeptide repeat-containing protein At3g49240,... | 0.07 | OrthoFinder output from all 47 species | |
Gb_33759 | GRP23 | Pentatricopeptide repeat-containing protein At3g49240,... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os05g30240.1 | GRP23, LOC_Os05g30240 | Pentatricopeptide repeat-containing protein At1g10270... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os11g24570.1 | emb1796, LOC_Os11g24570 | Pentatricopeptide repeat-containing protein At3g49240,... | 0.03 | OrthoFinder output from all 47 species | |
MA_9161715g0010 | emb1796 | Pentatricopeptide repeat-containing protein At1g10270... | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g103160.3.1 | GRP23, Solyc01g103160 | Pentatricopeptide repeat-containing protein At1g10270... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g083280.4.1 | emb1796, Solyc03g083280 | Pentatricopeptide repeat-containing protein At3g49240,... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e004732_P001 | GRP23, Zm00001e004732 | Pentatricopeptide repeat-containing protein At1g10270... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 460 | 507 |
IPR002885 | Pentatricopeptide_repeat | 390 | 438 |
IPR002885 | Pentatricopeptide_repeat | 281 | 310 |
IPR002885 | Pentatricopeptide_repeat | 248 | 271 |
IPR002885 | Pentatricopeptide_repeat | 208 | 237 |
IPR002885 | Pentatricopeptide_repeat | 359 | 388 |
IPR002885 | Pentatricopeptide_repeat | 129 | 180 |
IPR002885 | Pentatricopeptide_repeat | 318 | 343 |
No external refs found! |