Aliases : ARF3, ETT, Zm00001e020205
Description : transcription factor (ARF)
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00221770 | ARF1,... | RNA biosynthesis.transcriptional activation.B3... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AT1G59750 | ARF1 | auxin response factor 1 | 0.03 | OrthoFinder output from all 47 species | |
AT2G46530 | ARF11 | auxin response factor 11 | 0.05 | OrthoFinder output from all 47 species | |
Adi_g061151 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Adi_g103007 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g02591 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g14536 | ARF1 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g14726 | ARF6 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g32730 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g33091 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g40259 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g51944 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g02260 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g27918 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g14401 | ARF16 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g22304 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene11714.t1 | ARF6, Aspi01Gene11714 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene33428.t1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene33428.t2 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0038.g026103 | ARF6 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g11427 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.03G049600.1 | ARF10, Ceric.03G049600 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.28G004000.1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01004942001 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01021553001 | ARF6 | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
Gb_17831 | ARF4 | Auxin response factor 4 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Gb_23186 | HSS, ARF1-BP, ARF2, ORE14 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Gb_39685 | ARF6 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Gb_39686 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g48060.1 | ARF3, ETT, LOC_Os01g48060 | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os01g70270.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g06910.1 | ARF6, LOC_Os02g06910 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g57610.1 | ARF8, ATARF8,... | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os05g43920.1 | ARF3, ETT, LOC_Os05g43920 | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os05g48870.1 | ARF3, ETT, LOC_Os05g48870 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os11g32110.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os12g41950.1 | ARF6, LOC_Os12g41950 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
Len_g08347 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g10088 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g14944 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_103763g0010 | ARF6 | Auxin response factor 6 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
MA_10430707g0020 | ARF19, IAA22, ARF11 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g19283 | ARF4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g33112 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g04439 | ARF10 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g19455 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g11690 | ARF6 | transcriptional repressor *(IAA/AUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g103050.3.1 | ARF1, Solyc01g103050 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g031970.4.1 | ARF8, ATARF8,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g047460.3.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
Solyc12g042070.3.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29254 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e013191_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e013639_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018165_P001 | ARF8, ATARF8,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018761_P001 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e023038_P001 | ARF10, Zm00001e023038 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e025163_P001 | ARF6, Zm00001e025163 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
No external refs found! |