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  5. Zm00001e020069_P002

Zm00001e020069_P002 (Zm00001e020069)


Aliases : Zm00001e020069

Description : NUP50 nucleoporin of nuclear pore complex


Gene families : OG0003460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003460_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Zm00001e020069_P002

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0021.g015765 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.02 OrthoFinder output from all 47 species
Cba_g15625 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.02 OrthoFinder output from all 47 species
Cba_g68744 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.03 OrthoFinder output from all 47 species
Ceric.05G088800.1 Ceric.05G088800 nucleoporin of nuclear pore complex *(NUP50) & original... 0.03 OrthoFinder output from all 47 species
Dac_g11501 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g06864 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017123001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
LOC_Os05g28190.1 LOC_Os05g28190 NUP50 nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Nbi_g11681 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0046907 intracellular transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015007 NUP2/50/61 12 69
IPR000156 Ran_bind_dom 313 429
No external refs found!