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  5. Zm00001e019397_P001

Zm00001e019397_P001 (ATNAP1, ATABC1, ABC1,...)


Aliases : ATNAP1, ATABC1, ABC1, LAF6, Zm00001e019397

Description : component SUF-B of plastidial SUF system assembly phase


Gene families : OG0003465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019397_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00124490 ATNAP1, ATABC1,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.04 OrthoFinder output from all 47 species
AT4G04770 ATNAP1, ATABC1,... ATP binding cassette protein 1 0.03 OrthoFinder output from all 47 species
Adi_g113695 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.02 OrthoFinder output from all 47 species
Ala_g02055 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.05 OrthoFinder output from all 47 species
Als_g30574 ATNAP1, ATABC1,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g06605 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Aop_g04268 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.02 OrthoFinder output from all 47 species
Cba_g20728 ATNAP1, ATABC1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G058200.1 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Cre15.g643600 ATNAP1, ATABC1,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.04 OrthoFinder output from all 47 species
Dde_g20912 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.02 OrthoFinder output from all 47 species
GSVIVT01012742001 ATNAP1, ATABC1,... UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_18941 ATNAP1, ATABC1,... component SUF-B of plastidial SUF system assembly phase 0.03 OrthoFinder output from all 47 species
LOC_Os01g61400.1 ATNAP1, ATABC1,... component SUF-B of plastidial SUF system assembly phase 0.05 OrthoFinder output from all 47 species
Len_g24438 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
MA_8540458g0010 ATNAP1, ATABC1,... UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g00614 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Nbi_g00957 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Pir_g10779 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.02 OrthoFinder output from all 47 species
Ppi_g16641 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.05 OrthoFinder output from all 47 species
Solyc02g080440.3.1 ATNAP1, ATABC1,... component SUF-B of plastidial SUF system assembly phase 0.04 OrthoFinder output from all 47 species
Solyc03g031700.4.1 ATNAP1, ATABC1,... component SUF-B of plastidial SUF system assembly phase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016226 iron-sulfur cluster assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000825 SUF_FeS_clus_asmbl_SufBD 280 513
No external refs found!