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  5. Zm00001e019346_P001

Zm00001e019346_P001 (HTB4, Zm00001e019346)


Aliases : HTB4, Zm00001e019346

Description : histone (H2B)


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019346_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00067980 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00085300 HTB4,... Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from all 47 species
AMTR_s00012p00085960 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from all 47 species
AMTR_s00012p00088340 HTB4,... Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from all 47 species
AT1G07790 HTB1 Histone superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G45980 HTB9, H2B Histone superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G46030 HTB11 Histone superfamily protein 0.14 OrthoFinder output from all 47 species
AT5G22880 HTB2, H2B histone B2 0.05 OrthoFinder output from all 47 species
AT5G59910 HTB4 Histone superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g004775 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g019244 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g021198 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021863 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g032961 HTB4 histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g068717 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086614 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102459 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g05666 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27849 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34176 HTB4 histone *(H2B) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene17102.t1 HTB4, Aspi01Gene17102 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27518.t1 HTB4, Aspi01Gene27518 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015129 HTB4 histone *(H2B) & original description: CDS=1-441 0.05 OrthoFinder output from all 47 species
Ceric.03G007900.1 HTB4, Ceric.03G007900 histone *(H2B) & original description: pacid=50571513... 0.08 OrthoFinder output from all 47 species
Ceric.04G053600.1 HTB4, Ceric.04G053600 histone *(H2B) & original description: pacid=50631349... 0.05 OrthoFinder output from all 47 species
Ceric.06G011800.1 HTB4, Ceric.06G011800 histone *(H2B) & original description: pacid=50619795... 0.06 OrthoFinder output from all 47 species
Ceric.12G022100.1 HTB4, Ceric.12G022100 histone *(H2B) & original description: pacid=50601168... 0.04 OrthoFinder output from all 47 species
Ceric.12G022200.1 HTB4, Ceric.12G022200 histone *(H2B) & original description: pacid=50601405... 0.05 OrthoFinder output from all 47 species
Ceric.18G011100.1 HTB4, Ceric.18G011100 histone *(H2B) & original description: pacid=50622059... 0.06 OrthoFinder output from all 47 species
Ceric.20G039500.1 HTB4, Ceric.20G039500 histone *(H2B) & original description: pacid=50566293... 0.11 OrthoFinder output from all 47 species
Ceric.20G076900.1 HTB4, Ceric.20G076900 histone *(H2B) & original description: pacid=50566872... 0.04 OrthoFinder output from all 47 species
Ceric.24G053000.1 HTB4, Ceric.24G053000 histone *(H2B) & original description: pacid=50628469... 0.06 OrthoFinder output from all 47 species
Ceric.24G053100.1 HTB4, Ceric.24G053100 histone *(H2B) & original description: pacid=50628870... 0.12 OrthoFinder output from all 47 species
Ceric.27G028800.1 HTB4, Ceric.27G028800 histone *(H2B) & original description: pacid=50605139... 0.06 OrthoFinder output from all 47 species
Ceric.27G029200.1 Ceric.27G029200 histone *(H2B) & original description: pacid=50606171... 0.08 OrthoFinder output from all 47 species
Ceric.29G085800.1 HTB4, Ceric.29G085800 histone *(H2B) & original description: pacid=50624560... 0.06 OrthoFinder output from all 47 species
Ceric.29G085900.1 HTB4, Ceric.29G085900 histone *(H2B) & original description: pacid=50624351... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000944.18 No alias Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g264800 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g264900 HTB4 Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
Cre06.g266750 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g271376 HTB4 Chromatin organisation.histones.H2B-type histone 0.12 OrthoFinder output from all 47 species
Cre06.g273850 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274250 HTB4 Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from all 47 species
Cre06.g275800 HTB4 Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g276550 HTB4 Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
Cre06.g276900 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g504550 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504700 HTB4 Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
Cre12.g505600 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g506200 HTB4 Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
Cre13.g570050 HTB4 Chromatin organisation.histones.H2B-type histone 0.09 OrthoFinder output from all 47 species
Cre17.g709150 HTB4 Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
Cre17.g710450 HTB4 Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
Cre17.g711750 HTB4 Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
Cre17.g713450 HTB4 Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g714050 HTB4 Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from all 47 species
Dac_g17045 HTB4 histone *(H2B) & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.11 OrthoFinder output from all 47 species
GSVIVT01025021001 No alias Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
GSVIVT01025025001 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Gb_02245 HTB11 histone (H2B) 0.11 OrthoFinder output from all 47 species
Gb_12082 No alias histone (H2B) 0.05 OrthoFinder output from all 47 species
Gb_12096 No alias histone (H2B) 0.07 OrthoFinder output from all 47 species
Gb_25549 No alias histone (H2B) 0.05 OrthoFinder output from all 47 species
Gb_26315 HTB11 histone (H2B) 0.04 OrthoFinder output from all 47 species
Gb_32754 HTB11 histone (H2B) 0.1 OrthoFinder output from all 47 species
Gb_41508 HTB4 histone (H2B) 0.04 OrthoFinder output from all 47 species
Gb_41617 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
LOC_Os01g05610.1 HTB11, LOC_Os01g05610 histone (H2B) 0.03 OrthoFinder output from all 47 species
LOC_Os01g05900.1 HTB11, LOC_Os01g05900 histone (H2B) 0.11 OrthoFinder output from all 47 species
LOC_Os01g05970.1 HTB11, LOC_Os01g05970 histone (H2B) 0.03 OrthoFinder output from all 47 species
LOC_Os01g06010.1 HTB11, LOC_Os01g06010 histone (H2B) 0.07 OrthoFinder output from all 47 species
LOC_Os01g62230.1 LOC_Os01g62230 histone (H2B) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49860.1 HTB11, LOC_Os05g49860 histone (H2B) 0.09 OrthoFinder output from all 47 species
LOC_Os08g38300.1 HTB11, LOC_Os08g38300 histone (H2B) 0.13 OrthoFinder output from all 47 species
Len_g04914 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428006g0010 HTB11 histone (H2B) 0.06 OrthoFinder output from all 47 species
MA_10435143g0010 No alias histone (H2B) 0.08 OrthoFinder output from all 47 species
MA_10436516g0020 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
MA_454575g0010 HTB4 histone (H2B) 0.04 OrthoFinder output from all 47 species
MA_6078786g0010 HTB11 histone (H2B) 0.05 OrthoFinder output from all 47 species
MA_8065g0010 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
MA_9293473g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
Mp4g13450.1 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Mp6g04070.1 No alias histone (H2B) 0.06 OrthoFinder output from all 47 species
Mp6g07010.1 HTB4 histone (H2B) 0.03 OrthoFinder output from all 47 species
Msp_g35793 No alias histone *(H2B) & original description: none 0.09 OrthoFinder output from all 47 species
Pp3c12_7610V3.1 HTB4, Pp3c12_7610 Histone superfamily protein 0.06 OrthoFinder output from all 47 species
Pp3c13_23540V3.1 HTB1, Pp3c13_23540 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c14_21050V3.1 HTB4, Pp3c14_21050 Histone superfamily protein 0.06 OrthoFinder output from all 47 species
Pp3c17_15750V3.1 HTB4, Pp3c17_15750 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c6_27740V3.1 HTB4, Pp3c6_27740 Histone superfamily protein 0.04 OrthoFinder output from all 47 species
Sam_g34350 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35037 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37866 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37867 No alias histone *(H2B) & original description: none 0.09 OrthoFinder output from all 47 species
Smo182308 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Solyc02g038690.1.1 HTB4, Solyc02g038690 histone (H2B) 0.07 OrthoFinder output from all 47 species
Solyc03g071620.2.1 Solyc03g071620 histone (H2B) 0.12 OrthoFinder output from all 47 species
Solyc05g055440.1.1 HTB11, Solyc05g055440 histone (H2B) 0.09 OrthoFinder output from all 47 species
Solyc06g074780.1.1 HTB4, Solyc06g074780 histone (H2B) 0.09 OrthoFinder output from all 47 species
Solyc06g074790.2.1 HTB11, Solyc06g074790 histone (H2B) 0.08 OrthoFinder output from all 47 species
Solyc06g075800.1.1 HTB11, Solyc06g075800 histone (H2B) 0.06 OrthoFinder output from all 47 species
Solyc11g007920.1.1 HTB11, Solyc11g007920 histone (H2B) 0.1 OrthoFinder output from all 47 species
Solyc11g007930.1.1 HTB11, Solyc11g007930 histone (H2B) 0.07 OrthoFinder output from all 47 species
Solyc11g066430.2.1 Solyc11g066430 histone (H2B) 0.08 OrthoFinder output from all 47 species
Solyc12g013510.1.1 HTB11, Solyc12g013510 histone (H2B) 0.06 OrthoFinder output from all 47 species
Spa_g01863 No alias histone *(H2B) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g32990 HTB4 histone *(H2B) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g45813 HTB4 histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g46015 HTB4 histone *(H2B) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g50701 No alias histone *(H2B) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g52507 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52508 No alias histone *(H2B) & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g05754 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06343 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09273 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006275 regulation of DNA replication IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 7 113
No external refs found!