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  5. Zm00001e019299_P002

Zm00001e019299_P002 (Zm00001e019299)


Aliases : Zm00001e019299

Description : Transcription factor PCL1 OS=Oryza sativa subsp. japonica (sp|q94dh3|pcl1_orysj : 108.0)


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019299_P002
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT2G40970 MYBC1 Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Cba_g13893 ARR11 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.39G052700.1 MYBC1, Ceric.39G052700 MYB-RELATED transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001336.2 No alias Two-component response regulator ARR1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g44410 RR14, ARR14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51493 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01029177001 ARR10, RR10 RNA biosynthesis.transcriptional activation.ARR-B... 0.05 OrthoFinder output from all 47 species
LOC_Os01g74020.1 LUX, PCL1, LOC_Os01g74020 component LUX of circadian clock Evening complex (EC) 0.02 OrthoFinder output from all 47 species
Sam_g39384 No alias subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g078310.2.1 Solyc10g078310 Transcription factor MYBC1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc10g080960.1.1 Solyc10g080960 Transcription factor MYBC1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 201 249
No external refs found!