Zm00001e019109_P003 (Zm00001e019109)


Aliases : Zm00001e019109

Description : Patellin-5 OS=Arabidopsis thaliana (sp|q9m0r2|patl5_arath : 388.0)


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019109_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00086020 evm_27.TU.AmTr_v1... Patellin-6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G22530 PATL2 PATELLIN 2 0.05 OrthoFinder output from all 47 species
AT1G72150 PATL1 PATELLIN 1 0.03 OrthoFinder output from all 47 species
AT1G72160 No alias Sec14p-like phosphatidylinositol transfer family protein 0.04 OrthoFinder output from all 47 species
Adi_g077645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26093 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene07223.t1 Aspi01Gene07223 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G077900.1 Ceric.03G077900 not classified & original description: pacid=50572716... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000310.37 No alias Patellin-6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g40895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000569001 No alias Patellin-6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036782001 No alias Patellin-4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_16675 No alias Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_20479 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g65380.1 LOC_Os01g65380 Patellin-5 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
LOC_Os05g35460.1 LOC_Os05g35460 Patellin-5 OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species
LOC_Os06g45990.2 LOC_Os06g45990 Patellin-4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_1115516g0010 No alias Patellin-3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_19741g0010 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9244g0010 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g16700.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g16720.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g17352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g070210.3.1 Solyc02g070210 Patellin-4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g064940.3.1 Solyc06g064940 Patellin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g07105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 294 453
IPR011074 CRAL/TRIO_N_dom 242 267
No external refs found!