- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : VAP27-2, Zm00001e018705
Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface
Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00057p00149330 | VAP27-2,... | Vesicle-associated protein 1-3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080055 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g02231 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g21723 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16736 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21422 | PVA12 | contact site protein (VAP27) of... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_28560 | No alias | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g42940.1 | PVA12, LOC_Os02g42940 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g23773 | VAP27-2 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021931 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g090910.3.1 | PVA12, Solyc01g090910 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g007200.4.1 | Solyc08g007200 | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g20156 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012869_P001 | Zm00001e012869 | Vesicle-associated protein 2-1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| CC | GO:1903293 | phosphatase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000535 | MSP_dom | 6 | 103 |
| No external refs found! |