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  5. Zm00001e018679_P001

Zm00001e018679_P001 (BAT1, Zm00001e018679)


Aliases : BAT1, Zm00001e018679

Description : gamma-aminobutyric acid transporter (GABP)


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018679_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g050833 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.09 OrthoFinder output from all 47 species
Ala_g04214 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Ala_g22286 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Aob_g15728 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Aop_g25166 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Aop_g70760 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Cba_g34532 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Cba_g46031 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G079000.1 BAT1, Ceric.12G079000 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g21344 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g22441 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01008812001 BAT1 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01022329001 BAT1 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Gb_35274 BAT1 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
Gb_38309 BAT1 gamma-aminobutyric acid transporter (GABP) 0.05 OrthoFinder output from all 47 species
LOC_Os01g71700.1 BAT1, LOC_Os01g71700 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
Len_g20177 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Len_g22396 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
MA_10426763g0010 BAT1 Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
MA_10435539g0010 BAT1 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
MA_58237g0020 BAT1 Amino-acid permease BAT1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g15510.1 BAT1 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
Msp_g06265 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Msp_g26154 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g13339 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Pir_g04396 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g15240 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g25884 No alias gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Spa_g11812 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Spa_g41618 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g15359 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Tin_g17722 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e020885_P001 Zm00001e020885 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 61 365
No external refs found!