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  5. Zm00001e018649_P001

Zm00001e018649_P001 (BOP2, Zm00001e018649)


Aliases : BOP2, Zm00001e018649

Description : transcriptional co-activator (BOP)


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018649_P001
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00112510 ATNPR3, NPR3,... Phytohormones.salicylic acid.perception and signal... 0.04 OrthoFinder output from all 47 species
AT5G45110 ATNPR3, NPR3 NPR1-like protein 3 0.05 OrthoFinder output from all 47 species
Aev_g11585 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12679 ATNPR3, NPR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18801 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02401 BOP2 transcriptional co-activator *(BOP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12706 BOP2 transcriptional co-activator *(BOP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04510 BOP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05458 BOP2 transcriptional co-activator *(BOP) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42280.t1 BOP2, Aspi01Gene42280 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013694 BOP2 not classified & original description: CDS=1-1683 0.06 OrthoFinder output from all 47 species
Azfi_s0069.g036623 BOP2 transcriptional co-activator *(BOP) & original... 0.03 OrthoFinder output from all 47 species
Cba_g48776 BOP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026274001 ATNPR3, NPR3 Phytohormones.salicylic acid.perception and signal... 0.04 OrthoFinder output from all 47 species
GSVIVT01033571001 BOP2 RNA biosynthesis.transcriptional activation.bZIP... 0.06 OrthoFinder output from all 47 species
Gb_06351 BOP1 no description available(sp|a0a072vim5|noot2_medtr : 169.0) 0.02 OrthoFinder output from all 47 species
LOC_Os01g09800.1 NPR1, SAI1,... salicylic acid receptor protein (NPR1). NPR1 systemic... 0.03 OrthoFinder output from all 47 species
LOC_Os01g56200.1 ATNPR3, NPR3,... receptor protein (NPR3|4) 0.02 OrthoFinder output from all 47 species
LOC_Os01g72020.1 BOP2, LOC_Os01g72020 transcriptional co-activator (BOP) 0.05 OrthoFinder output from all 47 species
LOC_Os11g04600.1 BOP2, LOC_Os11g04600 transcriptional co-activator (BOP) 0.04 OrthoFinder output from all 47 species
LOC_Os12g04410.1 BOP2, LOC_Os12g04410 transcriptional co-activator (BOP) 0.04 OrthoFinder output from all 47 species
Len_g07446 BOP2 transcriptional co-activator *(BOP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g32492 NPR4, ATNPR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_180602g0010 NPR1, SAI1, ATNPR1, NIM1 no description available(sp|e7bqv0|npr1_malhu : 110.0) 0.04 OrthoFinder output from all 47 species
Nbi_g03720 BOP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04874 ATNPR3, NPR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28487 ATNPR3, NPR3 receptor protein *(NPR3/4) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62749 BOP2 transcriptional co-activator *(BOP) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019986 BOP1 not classified & original description: CDS=344-2182 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020762 BOP1 not classified & original description: CDS=1-1593 0.02 OrthoFinder output from all 47 species
Sam_g07933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo88313 ATNPR3, NPR3 BTB/POZ domain and ankyrin repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc07g040690.3.1 NPR1, SAI1,... salicylic acid receptor protein (NPR1). NPR1 systemic... 0.02 OrthoFinder output from all 47 species
Solyc10g079460.1.1 BOP2, Solyc10g079460 transcriptional co-activator (BOP) 0.01 OrthoFinder output from all 47 species
Solyc10g079750.2.1 BOP2, Solyc10g079750 transcriptional co-activator (BOP) 0.06 OrthoFinder output from all 47 species
Tin_g12666 BOP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009187_P001 BOP2, Zm00001e009187 transcriptional co-activator (BOP) 0.06 OrthoFinder output from all 47 species
Zm00001e024092_P001 BOP2, Zm00001e024092 BTB/POZ domain and ankyrin repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e039194_P004 BOP2, Zm00001e039194 transcriptional co-activator (BOP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 14 56
IPR024228 NPR_central_dom 219 285
IPR020683 DUF3447 291 373
No external refs found!