1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e018493_P002

Zm00001e018493_P002 (XBAT31, Zm00001e018493)


Aliases : XBAT31, Zm00001e018493

Description : RING-HC-class E3 ligase


Gene families : OG0000851 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000851_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018493_P002
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Ala_g19542 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09598 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31913.t2 XBAT31, Aspi01Gene31913 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000532 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: CDS=97-1512 0.03 OrthoFinder output from all 47 species
Azfi_s3502.g115912 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: CDS=110-1369 0.03 OrthoFinder output from all 47 species
Ceric.07G072800.1 XBAT31, Ceric.07G072800 E3 ubiquitin ligase *(XBAT3) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g24788 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12579 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27313 XBAT31 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_13641 XBAT31 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os01g74320.1 XBAT31, LOC_Os01g74320 RING-HC-class E3 ligase 0.05 OrthoFinder output from all 47 species
Ore_g08392 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0270.g027011 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: CDS=728-2197 0.05 OrthoFinder output from all 47 species
Solyc06g076050.4.1 XBAT31, Solyc06g076050 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Tin_g01935 XBAT31 E3 ubiquiTin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 14 106
IPR020683 DUF3447 242 294
IPR020683 DUF3447 139 229
No external refs found!