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Aliases : Zm00001e018346
Description : Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana (sp|q9ls72|pp261_arath : 340.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e018346_P001 | |
| Cluster | HCCA: Cluster_154 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G37320 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G05240 | MEF19 | mitochondrial editing factor 19 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G13880 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g003181 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003199 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003245 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003807 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g007512 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035621 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036697 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036720 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g044807 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060732 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g065531 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g067925 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069220 | MEF19 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080656 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008656001 | No alias | Pentatricopeptide repeat-containing protein At5g50990... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g07050.1 | LOC_Os02g07050 | Pentatricopeptide repeat-containing protein At4g20770... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g32620.1 | LOC_Os03g32620 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g56400.1 | LOC_Os03g56400 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g63260.3 | LOC_Os03g63260 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g64370.1 | LOC_Os03g64370 | Pentatricopeptide repeat-containing protein At5g52850,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g35610.1 | LOC_Os04g35610 | RNA editing factor (SLO2) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g12510.1 | LOC_Os06g12510 | Pentatricopeptide repeat-containing protein At5g15300... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g27790.1 | REME1, LOC_Os06g27790 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g30940.1 | LOC_Os06g30940 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g05560.1 | LOC_Os07g05560 | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g10400.1 | CRR22, LOC_Os07g10400 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g39910.1 | LOC_Os07g39910 | Pentatricopeptide repeat-containing protein At1g25360... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g05750.1 | LOC_Os08g05750 | Pentatricopeptide repeat-containing protein At4g16835,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g38610.1 | LOC_Os08g38610 | Pentatricopeptide repeat-containing protein At1g26900,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g40020.1 | MEF19, LOC_Os08g40020 | RNA editing factor (MEF19) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os09g15800.1 | LOC_Os09g15800 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g24680.1 | LOC_Os09g24680 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os11g37330.2 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g06650.1 | LOC_Os12g06650 | Pentatricopeptide repeat-containing protein At4g15720... | 0.07 | OrthoFinder output from all 47 species | |
| MA_39595g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| MA_412g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| MA_445076g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| Smo130453 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Smo98955 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g110010.3.1 | Solyc01g110010 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g082160.2.1 | CRR22, Solyc02g082160 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g119120.3.1 | Solyc03g119120 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g009400.3.1 | Solyc05g009400 | Pentatricopeptide repeat-containing protein At3g29230... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g053850.4.1 | Solyc06g053850 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g062610.2.1 | Solyc06g062610 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g064600.1.1 | Solyc06g064600 | Pentatricopeptide repeat-containing protein At1g56690,... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g069700.4.1 | Solyc06g069700 | Pentatricopeptide repeat-containing protein At5g61400... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g082880.2.1 | Solyc06g082880 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g042760.1.1 | Solyc07g042760 | Pentatricopeptide repeat-containing protein At4g31070,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g023640.1.1 | Solyc08g023640 | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g065710.1.1 | OTP86, Solyc09g065710 | RNA editing factor (OTP86) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g008970.1.1 | Solyc11g008970 | Pentatricopeptide repeat-containing protein At4g39952,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014800_P001 | OTP82, Zm00001e014800 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| No external refs found! |