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  5. Zm00001e018305_P001

Zm00001e018305_P001 (SYP132, ATSYP132,...)


Aliases : SYP132, ATSYP132, Zm00001e018305

Description : SYP1-group Qa-type SNARE component


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018305_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G11820 SYP121,... syntaxin of plants 121 0.03 OrthoFinder output from all 47 species
Adi_g006737 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Als_g11023 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Gb_27100 ATSYP124, SYP124 Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.03 OrthoFinder output from all 47 species
LOC_Os06g07200.1 SYP132,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
MA_10427190g0010 ATSYP131, SYP131 SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Pir_g30149 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Sam_g09118 No alias Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Sam_g36661 No alias Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 245 297
IPR006011 Syntaxin_N 40 244
No external refs found!