1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e018263_P001

Zm00001e018263_P001 (Zm00001e018263)


Aliases : Zm00001e018263

Description : histone (H3)


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018263_P001
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from all 47 species
AMTR_s00027p00248560 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
AMTR_s00225p00023630 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
AT1G09200 No alias Histone superfamily protein 0.08 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G10400 No alias Histone superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.08 OrthoFinder output from all 47 species
Adi_g014654 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08007 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12785 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06864 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11657 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23279 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61760 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g00368 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19848 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01931.t1 Aspi01Gene01931 histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02052.t1 Aspi01Gene02052 histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42452.t1 Aspi01Gene42452 histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58554.t1 Aspi01Gene58554 histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0109.g045300 No alias histone H3 variant *(CENH3) & original description: CDS=340-828 0.02 OrthoFinder output from all 47 species
Ceric.06G075200.1 Ceric.06G075200 histone *(H3) & original description: pacid=50619967... 0.03 OrthoFinder output from all 47 species
Ceric.10G013500.1 Ceric.10G013500 histone *(H3) & original description: pacid=50612923... 0.03 OrthoFinder output from all 47 species
Ceric.10G015500.1 Ceric.10G015500 histone *(H3) & original description: pacid=50612308... 0.03 OrthoFinder output from all 47 species
Ceric.12G022300.1 Ceric.12G022300 histone *(H3) & original description: pacid=50601599... 0.03 OrthoFinder output from all 47 species
Ceric.14G025000.1 Ceric.14G025000 histone *(H3) & original description: pacid=50634383... 0.03 OrthoFinder output from all 47 species
Ceric.14G043400.1 Ceric.14G043400 histone *(H3) & original description: pacid=50633664... 0.02 OrthoFinder output from all 47 species
Ceric.19G072200.1 Ceric.19G072200 histone *(H3) & original description: pacid=50576221... 0.03 OrthoFinder output from all 47 species
Ceric.19G072300.1 Ceric.19G072300 histone *(H3) & original description: pacid=50576158... 0.03 OrthoFinder output from all 47 species
Ceric.1Z177000.1 Ceric.1Z177000 histone *(H3) & original description: pacid=50628432... 0.03 OrthoFinder output from all 47 species
Ceric.1Z286600.1 Ceric.1Z286600 not classified & original description: pacid=50632714... 0.03 OrthoFinder output from all 47 species
Ceric.27G025100.1 Ceric.27G025100 histone *(H3) & original description: pacid=50605832... 0.03 OrthoFinder output from all 47 species
Ceric.27G025200.1 Ceric.27G025200 histone *(H3) & original description: pacid=50606238... 0.03 OrthoFinder output from all 47 species
Ceric.27G026100.1 Ceric.27G026100 histone *(H3) & original description: pacid=50605944... 0.03 OrthoFinder output from all 47 species
Ceric.27G029000.1 Ceric.27G029000 histone *(H3) & original description: pacid=50605580... 0.03 OrthoFinder output from all 47 species
Ceric.27G029300.1 Ceric.27G029300 histone *(H3) & original description: pacid=50605405... 0.03 OrthoFinder output from all 47 species
Ceric.27G029400.1 Ceric.27G029400 histone *(H3) & original description: pacid=50605419... 0.03 OrthoFinder output from all 47 species
Ceric.30G057000.1 Ceric.30G057000 histone *(H3) & original description: pacid=50609365... 0.03 OrthoFinder output from all 47 species
Ceric.37G016300.1 Ceric.37G016300 histone *(H3) & original description: pacid=50616425... 0.02 OrthoFinder output from all 47 species
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265500 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Dac_g02480 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04344 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12416 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11158 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g27747 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01828 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20346 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31894 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.06 OrthoFinder output from all 47 species
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.05 OrthoFinder output from all 47 species
Gb_15586 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Gb_27618 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Gb_29026 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Gb_36661 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Gb_40804 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64640.1 LOC_Os01g64640 histone (H3) 0.06 OrthoFinder output from all 47 species
LOC_Os04g34240.1 LOC_Os04g34240 histone (H3) 0.05 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.04 OrthoFinder output from all 47 species
LOC_Os05g41080.1 LOC_Os05g41080 histone H3 variant (CENH3) 0.04 OrthoFinder output from all 47 species
LOC_Os06g04030.1 LOC_Os06g04030 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06460.1 LOC_Os06g06460 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06510.1 LOC_Os06g06510 histone (H3) 0.08 OrthoFinder output from all 47 species
LOC_Os11g05730.1 LOC_Os11g05730 histone (H3) 0.06 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05015 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g06032 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26206 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45428 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25103 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
MA_10432805g0020 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_113838g0010 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_17527g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_197719g0010 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
MA_210354g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_356208g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_475294g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_561217g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_56411g0010 No alias histone (H3) 0.08 OrthoFinder output from all 47 species
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.03 OrthoFinder output from all 47 species
Mp3g09090.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp7g10730.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Mp7g18030.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Msp_g33278 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g36081 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41988 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07788 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07789 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07072 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07092 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g10158 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c20_8550V3.1 Pp3c20_8550 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c24_13230V3.1 Pp3c24_13230 Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007202 No alias not classified & original description: CDS=224-661 0.03 OrthoFinder output from all 47 species
Sam_g20165 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22036 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Smo171192 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 OrthoFinder output from all 47 species
Smo269004 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.05 OrthoFinder output from all 47 species
Solyc01g079110.4.1 Solyc01g079110 histone (H3) 0.09 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.07 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.07 OrthoFinder output from all 47 species
Solyc01g095650.4.1 HTR12, CENH3,... histone H3 variant (CENH3) 0.03 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.04 OrthoFinder output from all 47 species
Solyc05g051500.4.1 Solyc05g051500 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc10g008910.1.1 Solyc10g008910 histone (H3) 0.06 OrthoFinder output from all 47 species
Solyc12g056540.1.1 Solyc12g056540 histone (H3) 0.08 OrthoFinder output from all 47 species
Spa_g08360 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14563 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18210 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33395 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33705 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52114 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52464 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56118 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04797 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22408 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43939 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45756 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029901_P001 Zm00001e029901 histone (H3) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!