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  5. Zm00001e018123_P001

Zm00001e018123_P001 (AAT1, CAT1, Zm00001e018123)


Aliases : AAT1, CAT1, Zm00001e018123

Description : cationic amino acid transporter (CAT)


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018123_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g022679 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Aev_g45240 CAT5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03085 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene52622.t1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene62609.t1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Dac_g13010 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g08835 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g20216 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01003684001 ATCAT6, CAT6 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Nbi_g06718 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g18287 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005030_P001 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Zm00001e024163_P002 ATCAT6, CAT6,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 71 442
IPR029485 CAT_C 514 564
No external refs found!