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  5. Zm00001e018022_P001

Zm00001e018022_P001 (Zm00001e018022)


Aliases : Zm00001e018022

Description : Putative pentatricopeptide repeat-containing protein At5g43820 OS=Arabidopsis thaliana (sp|p0c8r0|pp416_arath : 477.0)


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018022_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G62470 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g04442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31662.t1 Aspi01Gene31662 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020723.110 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01029740001 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.02 OrthoFinder output from all 47 species
LOC_Os08g17080.1 LOC_Os08g17080 Pentatricopeptide repeat-containing protein At1g80880,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 282 308
IPR002885 Pentatricopeptide_repeat 461 486
IPR002885 Pentatricopeptide_repeat 423 450
IPR002885 Pentatricopeptide_repeat 247 276
IPR002885 Pentatricopeptide_repeat 313 361
No external refs found!