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  5. Zm00001e017933_P003

Zm00001e017933_P003 (CCR2, ATGRP7, GRP7,...)


Aliases : CCR2, ATGRP7, GRP7, GR-RBP7, Zm00001e017933

Description : RNA chaperone (RZ1|GR-RBP)


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017933_P003

Target Alias Description ECC score Gene Family Method Actions
AT3G26420 ATRZ-1A RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.04 OrthoFinder output from all 47 species
Adi_g016820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g040241 GR-RBP5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g081940 GR-RBP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09046 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g01618 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20823 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g00975 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013350 GRP2, ATGRP2, GR-RBP2 not classified & original description: CDS=1-1425 0.02 OrthoFinder output from all 47 species
Dde_g13483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21776 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036082001 No alias Small RNA-binding protein 11, chloroplastic... 0.03 OrthoFinder output from all 47 species
Gb_03401 ATRZ-1A Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_24306 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.01 OrthoFinder output from all 47 species
LOC_Os03g46770.1 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.05 OrthoFinder output from all 47 species
Len_g01590 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02645 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430060g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_2290596g0010 GR-RBP3 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g07947 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29443 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09294 GR-RBP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10142 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17831 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26099 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g24558 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g26697 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52143 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g104840.4.1 ATRZ-1A, Solyc01g104840 RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Solyc07g049270.4.1 Solyc07g049270 Glycine-rich RNA-binding protein 4, mitochondrial... 0.1 OrthoFinder output from all 47 species
Solyc11g008210.3.1 Solyc11g008210 Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g30660 GR-RBP3 RNA ediTing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 79
No external refs found!