Zm00001e017793_P002 (Zm00001e017793)

Aliases : Zm00001e017793

Description : SINA-class E3 ligase

Gene families : OG0000462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e017793_P002

Target	Alias	Description	ECC score	Gene Family Method
AT3G13672	No alias	TRAF-like superfamily protein	0.02	OrthoFinder output from all 47 species
Adi_g010007	No alias	E3 ubiquitin ligase *(SINA) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g110024	SINAT2	E3 ubiquitin ligase *(SINA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene36542.t1	Aspi01Gene36542	E3 ubiquitin ligase *(SINA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene53086.t1	Aspi01Gene53086	E3 ubiquitin ligase *(SINA) & original description: none	0.03	OrthoFinder output from all 47 species
Gb_19602	No alias	SINA-class E3 ligase	0.03	OrthoFinder output from all 47 species
LOC_Os06g20610.1	LOC_Os06g20610	E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
Lfl_g10480	No alias	E3 ubiquitin ligase *(SINA) & original description: none	0.03	OrthoFinder output from all 47 species
MA_9566834g0010	No alias	SINA-class E3 ligase	0.03	OrthoFinder output from all 47 species
Smo97849	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0008199	ferric iron binding	IEP	HCCA
BP	GO:0008272	sulfate transport	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072348	sulfur compound transport	IEP	HCCA
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018121	7-in-absentia-prot_TRAF-dom	134	238

External Links

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Zm00001e017793_P002 (Zm00001e017793)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation