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  5. Zm00001e017534_P003

Zm00001e017534_P003 (Zm00001e017534)


Aliases : Zm00001e017534

Description : Pectin acetylesterase 3 OS=Arabidopsis thaliana (sp|o80731|pae3_arath : 397.0)


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017534_P003
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT3G05910 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
AT3G09405 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
AT5G26670 No alias Pectinacetylesterase family protein 0.02 OrthoFinder output from all 47 species
Adi_g053353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20025 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28037 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03038 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22603 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51899.t1 Aspi01Gene51899 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51900.t1 Aspi01Gene51900 pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07334 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08706 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017717001 No alias Cell wall.pectin.modification and degradation.pectin... 0.02 OrthoFinder output from all 47 species
GSVIVT01028921001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
GSVIVT01031342001 No alias Cell wall.pectin.modification and degradation.pectin... 0.02 OrthoFinder output from all 47 species
GSVIVT01036914001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
Gb_04448 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Gb_06563 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Gb_15309 No alias pectin acetylesterase 0.05 OrthoFinder output from all 47 species
Gb_28230 No alias Pectin acetylesterase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66840.1 LOC_Os01g66840 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os10g40290.1 LOC_Os10g40290 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Lfl_g19602 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39811 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
MA_52077g0010 No alias pectin acetylesterase 0.05 OrthoFinder output from all 47 species
MA_8045151g0010 No alias Pectin acetylesterase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g13760.1 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Msp_g15514 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29610 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03265 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38138 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29548 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
Solyc08g005800.4.1 Solyc08g005800 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc08g074990.3.1 Solyc08g074990 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Solyc08g075060.4.1 Solyc08g075060 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc10g050750.3.1 Solyc10g050750 pectin acetylesterase 0.05 OrthoFinder output from all 47 species
Solyc12g019440.3.1 Solyc12g019440 pectin acetylesterase 0.07 OrthoFinder output from all 47 species
Tin_g14160 No alias pecTin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19814 No alias pecTin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028575_P002 Zm00001e028575 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e035651_P001 Zm00001e035651 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e037910_P001 Zm00001e037910 pectin acetylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 52 196
IPR004963 PAE/NOTUM 299 405
No external refs found!