- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : UBC20, Zm00001e017345
Description : E2 ubiquitin conjugating protein (APC/C)
Gene families : OG0002468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002468_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00053p00175140 | UBC20,... | Cell cycle.mitosis and meiosis.metaphase to anaphase... | 0.09 | OrthoFinder output from all 47 species | |
| Als_g05340 | UBC20 | E2 ubiquitin-conjugating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g37477 | UBC19 | E2 ubiquitin-conjugating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G015500.1 | UBC19, Ceric.25G015500 | E2 ubiquitin-conjugating protein & original description:... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g30508 | UBC19 | E2 ubiquitin-conjugating protein & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01016300001 | UBC20 | Cell cycle.mitosis and meiosis.metaphase to anaphase... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031547001 | UBC20 | Cell cycle.mitosis and meiosis.metaphase to anaphase... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g16650.1 | UBC20, LOC_Os01g16650 | E2 ubiquitin conjugating protein (APC/C) | 0.15 | OrthoFinder output from all 47 species | |
| Len_g15646 | UBC20 | E2 ubiquitin-conjugating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11955 | UBC19 | E2 ubiquitin-conjugating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g02664 | UBC20 | E2 ubiquitin-conjugating protein & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g38909 | UBC20 | E2 ubiquitin-conjugating protein & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g44236 | UBC20 | E2 ubiquitin-conjugating protein & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g44237 | UBC20 | E2 ubiquitin-conjugating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37401 | No alias | E2 ubiquitin-conjugating protein & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g065190.3.1 | UBC20, Solyc11g065190 | E2 ubiquitin conjugating protein (APC/C) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g48430 | UBC20 | E2 ubiquitin-conjugating protein & original description: none | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000608 | UBQ-conjugat_E2 | 43 | 177 |
| No external refs found! |