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  5. Zm00001e017298_P002

Zm00001e017298_P002 (Zm00001e017298)


Aliases : Zm00001e017298

Description : regulatory component RPN11 of 26S proteasome


Gene families : OG0003199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017298_P002
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Aop_g01609 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene49217.t1 Aspi01Gene49217 regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ceric.06G045400.1 Ceric.06G045400 regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001542.22 No alias Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Cre01.g011500 No alias Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Gb_14964 No alias regulatory component RPN11 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os05g30800.1 LOC_Os05g30800 regulatory component RPN11 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Lfl_g00788 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Mp5g01180.1 No alias regulatory component RPN11 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Ore_g05993 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sam_g07997 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sam_g07998 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo271544 No alias Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 25 136
IPR024969 Rpn11/EIF3F_C 171 289
No external refs found!