LOC_Os03g47830 (Os03g0682600)

Aliases : Os03g0682600

Description : 33.99 development.unspecified Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus. ARGONAUTE 1 (AGO1)

Gene families : OG_01_0000084 (Gene family) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g47830
Cluster HCCA cluster: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g40320 Os02g0616300 29.2.3 protein.synthesis.initiation Encodes a member of... 0.03 Gene family
Solyc06g073530.2.1 Solyc06g073530.2 27.3.36 RNA.regulation of transcription.Argonaute AGO4... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032474 Argonaute_N 138 259
IPR003165 Piwi 542 847
IPR003100 PAZ_dom 310 379
IPR032472 ArgoL2 388 434
IPR032473 Argonaute_Mid_dom 445 523
No external refs found!