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  5. Zm00001e016871_P001

Zm00001e016871_P001 (Zm00001e016871)


Aliases : Zm00001e016871

Description : Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana (sp|q9fje6|pp437_arath : 665.0)


Gene families : OG0001724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001724_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016871_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g068997 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0775.g086523 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
LOC_Os01g06000.1 RPS15A, LOC_Os01g06000 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Sam_g09165 No alias component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 340 387
IPR002885 Pentatricopeptide_repeat 515 562
IPR002885 Pentatricopeptide_repeat 761 807
IPR002885 Pentatricopeptide_repeat 689 731
IPR002885 Pentatricopeptide_repeat 897 944
IPR002885 Pentatricopeptide_repeat 443 492
IPR002885 Pentatricopeptide_repeat 618 666
IPR002885 Pentatricopeptide_repeat 584 611
IPR002885 Pentatricopeptide_repeat 859 888
IPR002885 Pentatricopeptide_repeat 308 336
IPR002885 Pentatricopeptide_repeat 831 858
No external refs found!