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  5. Zm00001e016822_P004

Zm00001e016822_P004 (Zm00001e016822)


Aliases : Zm00001e016822

Description : photosynthetic acclimation PBCP phosphatase


Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016822_P004
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT2G30170 No alias Protein phosphatase 2C family protein 0.09 OrthoFinder output from all 47 species
AT4G33500 No alias Protein phosphatase 2C family protein 0.05 OrthoFinder output from all 47 species
Aev_g47640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32280 No alias phosphatase *(PBCP) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20128 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0095.g043630 No alias phosphatase *(PBCP) & original description: CDS=45-986 0.03 OrthoFinder output from all 47 species
Cba_g68354 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.1Z173900.1 Ceric.1Z173900 phosphatase *(PBCP) & original description:... 0.1 OrthoFinder output from all 47 species
Cre06.g257850 No alias Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Dac_g09847 No alias phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33331 No alias phosphatase *(PBCP) & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g26968 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02459 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17993 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01024641001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
GSVIVT01029794001 No alias Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os01g07090.1 LOC_Os01g07090 photosynthetic acclimation PBCP phosphatase 0.13 OrthoFinder output from all 47 species
LOC_Os03g09220.1 LOC_Os03g09220 Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Len_g20278 No alias phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17211 No alias phosphatase *(PBCP) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g05138 No alias phosphatase *(PBCP) & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g05276 No alias phosphatase *(PBCP) & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g04619 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24669 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g105020.3.1 Solyc01g105020 Probable protein phosphatase 2C 71 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
Solyc06g007350.4.1 Solyc06g007350 photosynthetic acclimation PBCP phosphatase 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 100 317
No external refs found!