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Aliases : Zm00001e016582
Description : mRNA-binding regulatory factor (TZF)
Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e016582_P001 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00102750 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G03790 | SOM | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G19810 | No alias | CCCH-type zinc finger family protein | 0.07 | OrthoFinder output from all 47 species | |
| AT2G40140 | SZF2, ATSZF2, ZFAR1, CZF1 | zinc finger (CCCH-type) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G55980 | ATSZF1, SZF1 | salt-inducible zinc finger 1 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g045996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g046241 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g054846 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g075958 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g113887 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g04723 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g47721 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07949 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g20797 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g32930 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene28172.t1 | Aspi01Gene28172 | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0203.g057679 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G078500.1 | Ceric.04G078500 | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G046400.1 | Ceric.07G046400 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G002100.1 | ATTZF1, ATCTH,... | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z168000.1 | ATTZF1, ATCTH,... | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G056800.1 | ATTZF1, ATCTH,... | regulatory factor *(TZF) of mRNA stress granule... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g24032 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04434 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01013901001 | PEI1 | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024728001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032807001 | SZF2, ATSZF2, ZFAR1, CZF1 | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g03760.1 | LOC_Os05g03760 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g10670.1 | LOC_Os05g10670 | mRNA-binding regulatory factor (TZF) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g45020.1 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_329868g0010 | No alias | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15903 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10809 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g26219 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g24839 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g25039 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30312 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01109 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g001071 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004066 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007306 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0030.g010425 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g052570.3.1 | SZF2, ATSZF2,... | mRNA-binding regulatory factor (TZF) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g053750.1.1 | SOM, Solyc07g053750 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g014644.1.1 | PEI1, Solyc09g014644 | mRNA-binding regulatory factor (TZF) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc09g150108.1.1 | PEI1, Solyc09g150108 | mRNA-binding regulatory factor (TZF) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g43052 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018292_P001 | Zm00001e018292 | mRNA-binding regulatory factor (TZF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e027132_P001 | Zm00001e027132 | mRNA-binding regulatory factor (TZF) | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e027454_P001 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027566_P001 | Zm00001e027566 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032199_P001 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009733 | response to auxin | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |