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  5. Zm00001e016554_P001

Zm00001e016554_P001 (Zm00001e016554)


Aliases : Zm00001e016554

Description : transcription factor (bHLH)


Gene families : OG0011158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011158_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016554_P001
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00208400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
LOC_Os01g09900.1 LOC_Os01g09900 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g09990.1 LOC_Os01g09990 transcription factor (bHLH) 0.1 OrthoFinder output from all 47 species
LOC_Os05g11070.1 LOC_Os05g11070 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
MA_9118567g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g039570.3.1 Solyc07g039570 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 250 292
No external refs found!