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  5. Zm00001e016532_P001

Zm00001e016532_P001 (LZF1, STH3, DBB3,...)


Aliases : LZF1, STH3, DBB3, Zm00001e016532

Description : transcription factor (BBX-DBB)


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016532_P001

Target Alias Description ECC score Gene Family Method Actions
Ala_g36004 STO not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08244 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01696 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08389.t1 LZF1, STH3,... BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0133.g049310 LZF1, STH3, DBB3 BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.11G021600.1 Ceric.11G021600 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z197300.1 LZF1, STH3,... BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G000800.1 LZF1, STH3,... BBX class-IV transcription factor & original... 0.04 OrthoFinder output from all 47 species
LOC_Os01g10580.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.06 OrthoFinder output from all 47 species
LOC_Os02g39360.1 STH, LOC_Os02g39360 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Nbi_g02898 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19854 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31979 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32457 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018285 STO BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc12g089240.2.1 STH2, Solyc12g089240 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Spa_g54082 STO BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12761 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14964 STH BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 55 87
No external refs found!