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  5. Zm00001e016496_P002

Zm00001e016496_P002 (CID9, Zm00001e016496)


Aliases : CID9, Zm00001e016496

Description : Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana (sp|q9lrr6|cid9_arath : 291.0)


Gene families : OG0000804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016496_P002

Target Alias Description ECC score Gene Family Method Actions
AT3G49390 CID10 CTC-interacting domain 10 0.03 OrthoFinder output from all 47 species
Adi_g116982 CID10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07610 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26632 CID10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10610 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13676 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g35030.3 CID8, LOC_Os06g35030 Polyadenylate-binding protein-interacting protein 11... 0.04 OrthoFinder output from all 47 species
Len_g12977 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18828 CID11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09174 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17641 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018469 CID12, ATRBP37, RBP37 not classified & original description: CDS=247-1266 0.02 OrthoFinder output from all 47 species
Spa_g21523 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 213 276
IPR000504 RRM_dom 116 178
IPR009818 Ataxin-2_C 31 44
No external refs found!