Aliases : ARF11, Zm00001e016366
Description : transcription factor (ARF)
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.03 | OrthoFinder output from all 47 species | |
AT5G60450 | ARF4 | auxin response factor 4 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g024483 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g054964 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g068596 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g11824 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g26950 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g14726 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g33060 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g33091 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g22072 | ARF16 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g24155 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g21442 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene38983.t1 | ARF16, Aspi01Gene38983 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene61150.t1 | ARF16, Aspi01Gene61150 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0038.g026103 | ARF6 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0065.g035933 | ARF6 | not classified & original description: CDS=1-678 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0384.g067487 | ARF8, ATARF8 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g09882 | ARF1 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g78264 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.20G087500.1 | ARF1, Ceric.20G087500 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g07132 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g16914 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g16977 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g20944 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g22423 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g43864 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g11626 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g11966 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01004942001 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01011008001 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01020805001 | ARF6 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01021552001 | ARF6 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032251001 | ARF19, IAA22, ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01037136001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
Gb_31132 | ARF4 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g48060.1 | ARF3, ETT, LOC_Os01g48060 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g06910.1 | ARF6, LOC_Os02g06910 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g43910.1 | ARF10, LOC_Os04g43910 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g59430.1 | ARF17, LOC_Os04g59430 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g48870.1 | ARF3, ETT, LOC_Os05g48870 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g33940.1 | ARF16, LOC_Os10g33940 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05750 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g07072 | ARF16 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g07404 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g18657 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_103763g0010 | ARF6 | Auxin response factor 6 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
MA_10432349g0010 | HSS, ARF1-BP, ARF2, ORE14 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
MA_127981g0010 | ARF4 | Auxin response factor 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
MA_55076g0010 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Mp1g07070.1 | ARF10 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Pir_g35318 | ARF3, ETT | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g22826 | No alias | transcriptional repressor *(IAA/AUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g39909 | No alias | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g042260.4.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g008380.4.1 | ARF9, Solyc08g008380 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g082630.3.1 | ARF9, Solyc08g082630 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Spa_g05322 | ARF8, ATARF8 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29254 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g49441 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g04653 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e003229_P002 | ARF6, Zm00001e003229 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e006577_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006640_P002 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013639_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e025163_P001 | ARF6, Zm00001e025163 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030325_P003 | ARF6, Zm00001e030325 | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e041910_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
No external refs found! |