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  5. Zm00001e016302_P001

Zm00001e016302_P001 (ATRAC1, ROP3, ATGP2,...)


Aliases : ATRAC1, ROP3, ATGP2, ARAC1, ATROP3, Zm00001e016302

Description : small GTPase (ROP)


Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016302_P001

Target Alias Description ECC score Gene Family Method Actions
Als_g06146 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51141 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14199 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24268 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03631 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35948 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38983 ATRAC11, ARAC11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01837 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000577 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: CDS=437-1027 0.03 OrthoFinder output from all 47 species
Sam_g08722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51099 No alias small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51141 No alias small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04699 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18333 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52293 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 8 178
No external refs found!