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  5. Zm00001e016135_P001

Zm00001e016135_P001 (Zm00001e016135)


Aliases : Zm00001e016135

Description : no hits & (original description: none)


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016135_P001
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT1G18770 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G13228 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G13430 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G60080 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g012552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019630 ATCRT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g05398 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g03741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46210 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g01998 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g03081 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g29180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33056.t1 Aspi01Gene33056 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58136.t1 Aspi01Gene58136 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63558.t1 Aspi01Gene63558 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010490 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g67617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000880.42 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dac_g07739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03848 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g09357 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g32754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11152 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01015309001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01025505001 ATCRT1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_22124 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.05 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_30381 RHC1A Probable E3 ubiquitin-protein ligase RHC2A... 0.03 OrthoFinder output from all 47 species
LOC_Os01g44240.1 LOC_Os01g44240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g20870.1 LOC_Os03g20870 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
LOC_Os06g01200.1 LOC_Os06g01200 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.04 OrthoFinder output from all 47 species
LOC_Os08g38060.1 LOC_Os08g38060 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g03317 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g11929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16162 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g22017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31141 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g05536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27734 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Lfl_g28304 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Lfl_g29620 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
MA_63700g0010 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_8499g0020 CIP8 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g14693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47303 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g11583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10219 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g15069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g41837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24146 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g29204 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g36158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52386 No alias E3 ubiquitin ligase *(SNIPER) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08830 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g30226 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g55440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g05103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g088030.1.1 Solyc02g088030 E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g018050.1.1 Solyc05g018050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g008440.1.1 Solyc12g008440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40688 RHC1A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 68 110
No external refs found!